SYP42_ARATH » Syntaxin-42

SYP42_ARATH » Syntaxin-42
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Topology in Golgi apparatus membrane
TopologyGolgi lumenal side
cytoplasmic side
SYP42_ARATH » Syntaxin-42 » AtSYP42; AtTLG2b;
Hydrophobic Thickness 28.0 ± 1.0 Å
Tilt Angle 1 ± 0°
ΔGtransfer -35.8 kcal/mol
ΔGfold -20.5 kcal/mol
Links UniProtKB, Pfam, Interpro, iHOP, STRING
Topology In
TM Segments 298-322 (293-322)
Pathways

SNARE interactions in vesicular transport (KEGG)

PDB none
OPM none
Complexes none
Interactions

SYP41, Complex: SYP41:SYP42

SYP43, Complex: SYP43:SYP42, PubMed

SYP61, Complex: SYP42:SYP61

VA721, Complex: SYP42:VA721, PubMed

VTI12, Complex: VTI12:SYP42, PubMed

Domains

AA: 263-315, PDBID: 3B5N, Subunit J, Seq Identity:33%, SNARE domain

UniProt annotation for SYP42_ARATH » Syntaxin-42
FUNCTION: Vesicle trafficking protein that functions in the secretory pathway.

SUBUNIT: Interacts with VTI12 and SYP61 to form a t-SNARE complex and with VPS45.

UniProt features for SYP42_ARATH » Syntaxin-42
CHAIN 1 323 Syntaxin-42.
DOMAIN 227 289 t-SNARE coiled-coil homology.
Amino Acid Sequence for SYP42_ARATH » Syntaxin-42
MATRNRTTVY RKHRDACKSA RAPLSLSASD SFGGPVIEMV SGSFSRSNHS SYAPLNSYDP GPSSSDAFTI GMPPAWVDDS EEITFNIQKV RDKMNELAKA HSKALMPTFG DNKGIHREVE MLTHEITDLL RKSEKRLQML STRGPSEESN LRKNVQRSLA TDLQNLSMEL RRKQSTYLKR LQQQKEGQDE VDLEFNVNGK MSRLDEEDEL GGMGFDEHQT IKLKEGQHVS AEREREIQQV LGSVNDLAQI MKDLSALVID QGTIVDRIDY NVQNVSTSVE EGYKQLQKAE RTQREGAMVK CATILLVLCL IMIVLLILKN ILF