SYP41_ARATH » Syntaxin-41

SYP41_ARATH » Syntaxin-41
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Topology in Golgi apparatus membrane
TopologyGolgi lumenal side
cytoplasmic side
SYP41_ARATH » Syntaxin-41 » AtSYP41; AtTLG2a;
Hydrophobic Thickness 32.0 ± 2.6 Å
Tilt Angle 29 ± 0°
ΔGtransfer -26.9 kcal/mol
ΔGfold -18.5 kcal/mol
Links UniProtKB, Pfam, Interpro, iHOP, STRING
Topology In
TM Segments 296-321 (296-321)
Pathways

SNARE interactions in vesicular transport (KEGG)

PDB none
OPM none
Complexes none
Interactions

SYP42, Complex: SYP41:SYP42

SYP43, Complex: SYP43:SYP41, PubMed

SYP61, Complex: SYP41:SYP61

VA721, Complex: SYP41:VA721, PubMed

VTI11, Complex: SYP41:VTI11

VTI12, Complex: SYP41:VTI12

Domains

AA: 262-314, PDBID: 2NPS, Subunit B, Seq Identity:30%, SNARE domain

UniProt annotation for SYP41_ARATH » Syntaxin-41
FUNCTION: Vesicle trafficking protein that functions in the secretory pathway.

SUBUNIT: Interacts with VTI12 and SYP61 to form a t-SNARE complex and with VPS45.

UniProt features for SYP41_ARATH » Syntaxin-41
CHAIN 1 322 Syntaxin-41.
DOMAIN 226 288 t-SNARE coiled-coil homology.
COILED 116 146 Potential.
Amino Acid Sequence for SYP41_ARATH » Syntaxin-41
MATRNRTLLF RKYRNSLRSV RAPLSSSSLT GTRSGGVGPV IEMASTSLLN PNRSYAPIST EDPGTSSKGA ITVGLPPAWV DVSEEISVNI QRARTKMAEL GKAHAKALMP SFGDGKEDQH NIESLTQEIT FLLKKSEKQL QRLSASGPSE DSNVRKNVQR SLATDLQLLS MELRKKQSTY LKRLRQQKED GMDLEMNLSR NRYRPEEDDF GDMLNEHQMS KIKKSEEVSV EREKEIQQVV ESVNDLAQIM KDLSALVIDQ GTIVDRIDYN IENVATTVED GLKQLQKAER TQRHGGMVKC ASVLVILCFI MLLLLILKEI FL