PEX13_YEAST » Peroxisomal membrane protein PAS20

PEX13_YEAST » Peroxisomal membrane protein PAS20
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Topology in Peroxisome membrane
Topologyperoxisome lumenal side
cytoplasmic side
PEX13_YEAST » Peroxisomal membrane protein PAS20 » Peroxin-13;
Hydrophobic Thickness 33.6 ± 2.9 Å
Tilt Angle 16 ± 11°
ΔGtransfer -23.8 kcal/mol
ΔGfold -10.6 kcal/mol
Links UniProtKB, Pfam, Interpro, iHOP, STRING
Topology Out
TM Segments 261-283 (251-286)
Pathways

Peroxisome (KEGG)

PDB 1nm7 (310-370), 1jqq (A/B/C/D=299-386), 2v1r (A/B=299-374), 1n5z (A/B=299-386)
OPM none
Complexes

PEX14:PEX13_YEAST

Interactions

JID1, Complex: PEX13:JID1

KTR2, Complex: PEX13:KTR2, PubMed

PEX12, Complex: PEX13:PEX12, PubMed

PEX15, Complex: PEX13:PEX15, PubMed

QCR10, Complex: PEX13:QCR10

TDA6, Complex: PEX13:TDA6, PubMed

TOM22, Complex: PEX13:TOM22, PubMed

VPS62, Complex: PEX13:VPS62, PubMed

YNS1, Complex: PEX13:YNS1

YP091, Complex: PEX13:YP091, PubMed

Domains

AA: 138-283, Peroxin 13, N-terminal region

AA: 312-364, PDBID: 1JQQ, Subunit C, Seq Identity:100%, SH3 domain

UniProt annotation for PEX13_YEAST » Peroxisomal membrane protein PAS20
FUNCTION: Component of the peroxisomal translocation machinery with PEX14 and PEX17. Interacts with the PTS1 receptor (PAS10/PEX5).

MISCELLANEOUS: Present with 7900 molecules/cell in log phase SD medium.

UniProt features for PEX13_YEAST » Peroxisomal membrane protein PAS20
CHAIN 1 386 Peroxisomal membrane protein PAS20.
DOMAIN 306 372 SH3.
Amino Acid Sequence for PEX13_YEAST » Peroxisomal membrane protein PAS20
MSSTAVPRPK PWETSASLEE PQRNAQSLSA MMTSNQQDSR PTEESNNSNS ASESAPEVLP RPAALNSSGT YGESNTIPGI YGNSNYGIPY DNNPYSMNSI YGNSIGRYGY GGSYYGNNYG SFYGGGYGAG AGYGMNNGSG LGESTKATFQ LIESLIGAVT GFAQMLESTY MATHNSFFTM ISVAEQFGNL KEMLGSFFGI FAIMKFLKKI LYRATKGRLG IPPKNFAESE GSKNKLIEDF QKFNDSGTIN SNEKATRRKI SWKPLLFFLM AVFGFPYLLN KFITKLQTSG TIRASQGNGS EPIDPSKLEF ARALYDFVPE NPEMEVALKK GDLMAILSKK DPLGRDSDWW KVRTKNGNIG YIPYNYIEII KRRKKIEHVD DETRTH