PCDH9_HUMAN » Protocadherin-9

PCDH9_HUMAN » Protocadherin-9
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Topology in Plasma membrane
Topologyextracellular side
cytoplasmic side
PCDH9_HUMAN » Protocadherin-9 »
Hydrophobic Thickness 36.4 ± 2.0 Å
Tilt Angle 0 ± 0°
ΔGtransfer -55.0 kcal/mol
ΔGfold -28.5 kcal/mol
Links UniProtKB, Pfam, Interpro, iHOP, STRING, HGNC, HMDB
Topology Out
TM Segments 812-836 (810-842)
Pathways none
PDB 2ee0 (246-352)
OPM none
Complexes none
Interactions

RYK, Complex: PCDH9:RYK, PubMed

Domains

AA: 25-118, PDBID: 1WUZ, Subunit A, Seq Identity:29%, Cadherin-like

AA: 147-243, PDBID: 4ZPL, Subunit A, Seq Identity:35%, Cadherin domain

AA: 257-349, PDBID: 2EE0, Subunit A, Seq Identity:100%, Cadherin domain

AA: 370-460, PDBID: 2EE0, Subunit A, Seq Identity:25%, Cadherin domain

AA: 474-563, PDBID: 4ZPS, Subunit A, Seq Identity:37%, Cadherin domain

AA: 577-666, PDBID: 3PPE, Subunit A, Seq Identity:38%, Cadherin domain

AA: 687-772, PDBID: 2WBX, Subunit A, Seq Identity:30%, Cadherin domain

AA: 777-1000, Protocadherin

UniProt annotation for PCDH9_HUMAN » Protocadherin-9
FUNCTION: Potential calcium-dependent cell-adhesion protein.
UniProt features for PCDH9_HUMAN » Protocadherin-9
SIGNAL 1 23 Potential.
CHAIN 24 1237 Protocadherin-9.
DOMAIN 26 142 Cadherin 1.
DOMAIN 143 252 Cadherin 2.
DOMAIN 253 358 Cadherin 3.
DOMAIN 365 469 Cadherin 4.
DOMAIN 470 572 Cadherin 5.
DOMAIN 573 675 Cadherin 6.
DOMAIN 679 784 Cadherin 7.
Amino Acid Sequence for PCDH9_HUMAN » Protocadherin-9
MDLRDFYLLA ALIACLRLDS AIAQELIYTI REELPENVPI GNIPKDLNIS HINAATGTSA SLVYRLVSKA GDAPLVKVSS STGEIFTTSN RIDREKLCAG ASYAEENECF FELEVVILPN DFFRLIKIKI IVKDTNDNAP MFPSPVINIS IPENTLINSR FPIPSATDPD TGFNGVQHYE LLNGQSVFGL DIVETPEGEK WPQLIVQQNL DREQKDTYVM KIKVEDGGTP QKSSTAILQV TVSDVNDNRP VFKEGQVEVH IPENAPVGTS VIQLHATDAD IGSNAEIRYI FGAQVAPATK RLFALNNTTG LITVQRSLDR EETAIHKVTV LASDGSSTPA RATVTINVTD VNDNPPNIDL RYIISPINGT VYLSEKDPVN TKIALITVSD KDTDVNGKVI CFIEREVPFH LKAVYDNQYL LETSSLLDYE GTKEFSFKIV ASDSGKPSLN QTALVRVKLE DENDNPPIFN QPVIELSVSE NNRRGLYLTT ISATDEDSGK NADIVYQLGP NASFFDLDRK TGVLTASRVF DREEQERFIF TVTARDNGTP PLQSQAAVIV TVLDENDNSP KFTHNHFQFF VSENLPKYST VGVITVTDAD AGENKAVTLS ILNDNDNFVL DPYSGVIKSN VSFDREQQSS YTFDVKATDG GQPPRSSTAK VTINVMDVND NSPVVISPPS NTSFKLVPLS AIPGSVVAEV FAVDVDTGMN AELKYTIVSG NNKGLFRIDP VTGNITLEEK PAPTDVGLHR LVVNISDLGY PKSLHTLVLV FLYVNDTAGN ASYIYDLIRR TMETPLDRNI GDSSQPYQNE DYLTIMIAII AGAMVVIVVI FVTVLVRCRH ASRFKAAQRS KQGAEWMSPN QENKQNKKKK RKKRKSPKSS LLNFVTIEES KPDDAVHEPI NGTISLPAEL EEQSIGRFDW GPAPPTTFKP NSPDLAKHYK SASPQPAFHL KPDTPVSVKK HHVIQELPLD NTFVGGCDTL SKRSSTSSDH FSASECSSQG GFKTKGPLHT RQCNSHSKSD NIPVTPQKCP SSTGFHIQEN EESHYESQRR VTFHLPDGSQ ESCSDSGLGD HEPVGSGTLI SHPLPLVQPQ DEFYDQASPD KRTEADGNSD PNSDGPLGPR GLAEATEMCT QECLVLGHSD NCWMPPGLGP YQHPKSPLST FAPQKEWVKK DKLVNGHTLT RAWKEDSNRN QFNDRKQYGS NEGHFNNGSH MTDIPLANLK SYKQAGGATE SPKEHQL