FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic

FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
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Topology in Thylakoid membrane
Topologythylakoid lumen
chloroplast stroma
FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic » AtFTSH6;
Hydrophobic Thickness 29.0 ± 2.7 Å
Tilt Angle 21 ± 3°
ΔGtransfer -22.7 kcal/mol
ΔGfold -11.3 kcal/mol
Links UniProtKB, Pfam, Interpro, iHOP, STRING
Topology Out
TM Segments 169-190 (164-195)
Pathways none
PDB none
OPM none
Complexes none
Interactions none
Domains

AA: 58-162, PDBID: 2LNA, Subunit A, Seq Identity:19%, FtsH Extracellular

AA: 260-393, PDBID: 2R62, Subunit A, Seq Identity:77%, ATPase family associated with various cellular activities (AAA)

AA: 453-663, PDBID: 2CE7, Subunit F, Seq Identity:41%, Peptidase family M41

UniProt annotation for FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
FUNCTION: Probable ATP-dependent zinc metallopeptidase. Involved in the degradation of the light-harvesting complex of photosystem II (LHC II) during senescence or high light acclimation.

DOMAIN: The conserved lumenal (CL) domain (84-162) is present only in some FtsH homologs from organisms performing oxygenic photosynthesis.

UniProt features for FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
TRANSIT 1 75 Chloroplast (Potential).
TRANSIT 76 83 Thylakoid (By similarity).
CHAIN 84 688 ATP-dependent zinc metalloprotease FTSH 6, chloroplastic.
ACT_SITE 486 486 By similarity.
Amino Acid Sequence for FTSH6_ARATH » ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
MKMASSSSAL SFPLSNIPTC SKKSQQFQKP ASLSKSSHTH KPSLKTQILH HKFTKRNLLS LTTALGFTSA LGTVLAHPAK AEPEAPIEAT SNRMSYSRFL QHLKENEVKK VDLIENGTVA IVEISNPVVG KIQRVRVNLP GLPVDLVREM KEKNVDFAAH PMNVNWGAFL LNFLGNLGFP LILLVSLLLT SSSRRNPAGP NLPFGLGRSK AKFQMEPNTG ITFEDVAGVD EAKQDFEEIV EFLKTPEKFS ALGAKIPKGV LLTGPPGTGK TLLAKAIAGE AGVPFFSLSG SEFIEMFVGV GASRARDLFN KAKANSPCIV FIDEIDAVGR MRGTGIGGGN DEREQTLNQI LTEMDGFAGN TGVIVIAATN RPEILDSALL RPGRFDRQVS VGLPDIRGRE EILKVHSRSK KLDKDVSLSV IAMRTPGFSG ADLANLMNEA AILAGRRGKD KITLTEIDDS IDRIVAGMEG TKMIDGKSKA IVAYHEVGHA ICATLTEGHD PVQKVTLVPR GQARGLTWFL PGEDPTLVSK QQLFARIVGG LGGRAAEDVI FGEPEITTGA AGDLQQVTEI ARQMVTMFGM SEIGPWALTD PAVKQNDVVL RMLARNSMSE KLAEDIDSCV KKIIGDAYEV AKKHVRNNRE AIDKLVDVLL EKETLTGDEF RAILSEYTDQ PLNTDGDVRI RINDLISV