Thylakoid membrane (56 proteins)

Family Protein Name Protein ID Species Topology TM Segment (helix) Hydrophobic Thickness (Å) Tilt Angle (°) ΔGfold (kcal/mol) ΔGtransf (kcal/mol)
1.01.03.01. Serine/threonine-protein kinase STN7, chloroplastic STT7_ARATH Arabidopsis thaliana Out 84-105 (84-105) 31.0 ± 3.6 1 ± 1 -8.1 -15.3
1.01.03.01. Serine/threonine-protein kinase STN8, chloroplastic STN8_ARATH Arabidopsis thaliana Out 81-98 (80-99) 26.8 ± 1.2 2 ± 1 -4.1 -15.6
1.01.46.01. Calcium sensing receptor, chloroplastic CAS_ARATH Arabidopsis thaliana Out 186-211 (186-215) 29.6 ± 3.2 44 ± 1 -13.8 -19.5
1.04.01.05. Protein disulfide-isomerase LQY1 LQY1_ARATH Arabidopsis thaliana In 51-73 (48-74) 33.2 ± 2.2 5 ± 4 -9.1 -16.9
1.04.04.02. Preprotein translocase subunit SECE1 SECE1_ARATH Arabidopsis thaliana In 134-159 (129-165) 30.8 ± 3.4 40 ± 1 -12.5 -20.9
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial FTSHB_ARATH Arabidopsis thaliana In 301-326 (298-329) 31.2 ± 4.8 36 ± 4 -17.4 -22.6
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 8, chloroplastic FTSH8_ARATH Arabidopsis thaliana Out 161-183 (161-187) 29.6 ± 3.9 32 ± 4 -9.2 -19.6
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 6, chloroplastic FTSH6_ARATH Arabidopsis thaliana Out 169-190 (164-195) 29.0 ± 2.7 21 ± 3 -11.3 -22.7
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 5, chloroplastic FTSH5_ARATH Arabidopsis thaliana Out 192-213 (192-214) 29.4 ± 2.9 24 ± 4 -8.1 -20.7
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 2, chloroplastic FTSH2_ARATH Arabidopsis thaliana Out 169-190 (163-193) 31.2 ± 3.6 15 ± 7 -9.6 -19.0
1.04.59.05. ATP-dependent zinc metalloprotease FTSH 1, chloroplastic FTSH1_ARATH Arabidopsis thaliana Out 203-227 (202-228) 34.0 ± 3.8 15 ± 8 -12.4 -24.4
1.04.69.01. Protein HHL1, chloroplastic HHL1_ARATH Arabidopsis thaliana Und 93-114 (92-114) 30.0 ± 3.1 12 ± 10 -1.1 -8.3
1.04.70.01. Sec-independent protein translocase protein TATA, chloroplastic TATA_ARATH Arabidopsis thaliana Out 63-87 (60-87) 34.0 ± 4.0 7 ± 8 -5.0 -21.2
1.04.70.02. Sec-independent protein translocase protein TATB, chloroplastic TATB_ARATH Arabidopsis thaliana Out 81-105 (71-105) 34.0 ± 5.0 23 ± 1 -6.4 -21.5
1.04.71.01. UPF0603 protein At1g54780, chloroplastic U603_ARATH Arabidopsis thaliana Out 259-280 (252-284) 31.2 ± 3.0 4 ± 5 -15.4 -23.3
1.06.29.03. ATP synthase subunit b, chloroplastic ATPF_ARATH Arabidopsis thaliana Out 31-53 (31-58) 32.0 ± 4.0 20 ± 6 -4.2 -17.6
1.09.03.05. Cytochrome b6-f complex iron-sulfur subunit, chloroplastic UCRIA_ARATH Arabidopsis thaliana In 66-92 (61-92) 31.2 ± 5.2 34 ± 3 -8.6 -18.9
1.09.03.06. Apocytochrome f CYF_ARATH Arabidopsis thaliana Out 284-305 (281-308) 30.0 ± 2.1 8 ± 5 -13.9 -20.8
1.09.03.07. Cytochrome b6-f complex subunit 5 PETG_ARATH Arabidopsis thaliana Out 2-26 (2-31) 32.8 ± 5.4 40 ± 7 -18.9 -26.6
1.09.03.08. Cytochrome b6-f complex subunit 6 PETL_ARATH Arabidopsis thaliana Out 2-30 (2-30) 33.2 ± 6.0 30 ± 18 -17.2 -23.8
1.09.03.09. Cytochrome b6-f complex subunit 8 PETN_ARATH Arabidopsis thaliana Out 4-26 (3-27) 33.4 ± 3.9 5 ± 3 -16.7 -21.2
1.09.03.10. Cytochrome b6f complex subunit Q9SZY6_ARATH Arabidopsis thaliana Und 63-87 (61-89) 31.2 ± 4.6 25 ± 7 -15.5 -20.2
1.09.08.01. Photosystem I reaction center subunit III, chloroplastic PSAF_ARATH Arabidopsis thaliana Out 147-167 (142-176) 31.2 ± 4.0 2 ± 0 -7.2 -16.6
1.09.08.02. Photosystem I reaction center subunit VI-1, chloroplastic PSAH1_ARATH Arabidopsis thaliana In 99-119 (99-122) 30.2 ± 2.2 5 ± 5 -4.2 -18.0
1.09.08.02. Photosystem I reaction center subunit VI-2, chloroplastic PSAH2_ARATH Arabidopsis thaliana In 97-118 (96-122) 31.2 ± 0.9 0 ± 0 -3.4 -19.7
1.09.08.03. Photosystem I reaction center subunit VIII PSAI_ARATH Arabidopsis thaliana Out 7-29 (7-35) 33.0 ± 2.5 27 ± 11 -14.5 -27.1
1.09.08.04. Photosystem I reaction center subunit IX PSAJ_ARATH Arabidopsis thaliana In 9-29 (2-30) 30.8 ± 5.0 3 ± 11 -7.6 -12.3
1.09.09.01. Photosystem II reaction center protein H PSBH_ARATH Arabidopsis thaliana In 40-62 (39-64) 34.0 ± 1.5 3 ± 2 -18.4 -24.3
1.09.09.02. Photosystem II reaction center protein I PSBI_ARATH Arabidopsis thaliana Out 2-24 (2-25) 32.8 ± 3.9 13 ± 12 -17.0 -24.9
1.09.09.03. Photosystem II reaction center protein J PSBJ_ARATH Arabidopsis thaliana In 8-31 (7-33) 35.6 ± 3.0 1 ± 0 -15.8 -25.9
1.09.09.04. Photosystem II reaction center protein K PSBK_ARATH Arabidopsis thaliana Out 39-60 (39-60) 31.4 ± 1.9 22 ± 0 -14.3 -26.1
1.09.09.05. Photosystem II reaction center protein L PSBL_ARATH Arabidopsis thaliana In 17-37 (15-37) 30.6 ± 1.9 12 ± 2 -16.4 -22.0
1.09.09.06. Photosystem II reaction center protein M PSBM_ARATH Arabidopsis thaliana Out 5-28 (2-32) 33.2 ± 6.4 0 ± 18 -22.4 -30.2
1.09.09.07. Protein PsbN PSBN_ARATH Arabidopsis thaliana Und 2-24 (2-27) 30.8 ± 3.0 0 ± 0 -13.7 -32.3
1.09.09.08. Photosystem II reaction center protein T PSBT_ARATH Arabidopsis thaliana Out 3-23 (2-23) 32.4 ± 2.3 8 ± 2 -17.5 -23.8
1.09.09.09. Photosystem II reaction center W protein, chloroplastic PSBW_ARATH Arabidopsis thaliana Out 100-122 (98-123) 33.0 ± 2.5 7 ± 6 -17.7 -26.4
1.09.09.10. Cytochrome b559 subunit beta PSBF_ARATH Arabidopsis thaliana In 14-37 (12-38) 30.0 ± 2.4 1 ± 1 -4.7 -29.9
1.09.09.11. Cytochrome b559 subunit alpha PSBE_ARATH Arabidopsis thaliana In 20-42 (19-44) 29.8 ± 3.7 30 ± 7 -8.3 -15.2
1.09.09.12. Expressed protein Q9SKI3_ARATH Arabidopsis thaliana Und 86-107 (81-108) 30.6 ± 3.5 15 ± 12 -11.4 -18.8
1.09.16.01. Protein FLUORESCENT IN BLUE LIGHT, chloroplastic FLU_ARATH Arabidopsis thaliana Out 123-145 (121-149) 29.2 ± 2.2 2 ± 1 -14.8 -43.7
1.09.17.01. NAD(P)H-quinone oxidoreductase subunit T, chloroplastic NDHT_ARATH Arabidopsis thaliana Und 221-245 (218-245) 37.6 ± 4.8 0 ± 4 -21.6 -30.8
1.09.17.01. NAD(P)H-quinone oxidoreductase subunit U, chloroplastic NDHU_ARATH Arabidopsis thaliana Und 197-217 (194-217) 31.2 ± 4.0 15 ± 14 -11.3 -15.7
1.09.17.02. Photosynthetic NDH subunit of subcomplex B 4, chloroplastic PNSB4_ARATH Arabidopsis thaliana Und 91-112 (89-114) 29.8 ± 2.0 18 ± 3 -4.9 -15.0
1.09.30.01. L-ascorbate peroxidase T, chloroplastic APXT_ARATH Arabidopsis thaliana Out 395-416 (394-416) 29.2 ± 2.2 20 ± 7 -14.3 -18.4
1.09.43.01. Putative uncharacterized protein At5g51010 Q9FI47_ARATH Arabidopsis thaliana Und 127-150 (126-153) 33.2 ± 3.0 10 ± 5 -12.6 -20.3
1.09.43.01. At1g54500/F20D21_31 Q9SLI4_ARATH Arabidopsis thaliana Und 174-194 (170-194) 30.2 ± 2.7 13 ± 4 -14.9 -22.7
1.10.24.01. Rhodanese-like domain-containing protein 10 STR10_ARATH Arabidopsis thaliana Und 185-207 (184-213) 30.4 ± 1.6 24 ± 2 -6.6 -16.6
1.10.24.01. Rhodanese-like domain-containing protein 4A, chloroplastic STR4A_ARATH Arabidopsis thaliana Und 95-115 (92-118) 29.0 ± 3.5 2 ± 1 -9.2 -16.7
1.10.24.01. Rhodanese-like domain-containing protein 9, chloroplastic STR9_ARATH Arabidopsis thaliana Und 202-222 (200-222) 30.4 ± 4.0 11 ± 8 -8.7 -15.5
1.11.08.01. Thylakoidal processing peptidase 1, chloroplastic TPP1_ARATH Arabidopsis thaliana In 156-174 (155-175) 27.6 ± 1.7 13 ± 11 -5.0 -12.9
1.11.08.01. Probable thylakoidal processing peptidase 2, chloroplastic TPP2_ARATH Arabidopsis thaliana In 186-204 (185-205) 26.8 ± 1.8 15 ± 11 -4.9 -13.1
1.11.08.01. Chloroplast processing peptidase PLSP1_ARATH Arabidopsis thaliana In 114-133 (113-134) 24.8 ± 2.8 0 ± 0 -9.0 -25.7
1.11.24.01. Protein phosphatase 2C 57 P2C57_ARATH Arabidopsis thaliana In 364-385 (364-387) 31.0 ± 3.8 28 ± 0 -6.0 -14.3
1.13.03.01. Peptidyl-prolyl cis-trans isomerase FKBP17-2, chloroplastic FK172_ARATH Arabidopsis thaliana Und 72- 97 (68-102) 32.0 ± 3.0 29 ± 20 -10.0 -16.0
1.13.03.01. Peptidyl-prolyl cis-trans isomerase FKBP17-3, chloroplastic FK173_ARATH Arabidopsis thaliana Und 64-85 (59-88) 32.0 ± 2.8 1 ± 7 -8.8 -16.0
1.13.03.01. Photosynthetic NDH subunit of lumenal location 4, chloroplastic PNSL4_ARATH Arabidopsis thaliana Und 47-69 (41-75) 33.0 ± 2.5 7 ± 2 -3.7 -15.6